Protein–RNA interactions for Protein: Q9D287

Bcas2, Pre-mRNA-splicing factor SPF27, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bcas2Q9D287 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Gm10253-201ENSMUST00000194270 940 ntBASIC13.34□□□□□ -0.27
Bcas2Q9D287 Gm43575-201ENSMUST00000196420 516 ntBASIC13.34□□□□□ -0.27
Bcas2Q9D287 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.34□□□□□ -0.27
Bcas2Q9D287 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Bcas2Q9D287 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Bcas2Q9D287 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.33□□□□□ -0.28
Bcas2Q9D287 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Gm8396-201ENSMUST00000057361 823 ntBASIC13.33□□□□□ -0.28
Bcas2Q9D287 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Bcas2Q9D287 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm23935-201ENSMUST00000102303 57 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm24270-201ENSMUST00000102326 57 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Bcas2Q9D287 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm24245-201ENSMUST00000157318 57 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm29310-201ENSMUST00000185468 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm21825-201ENSMUST00000185728 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm29109-201ENSMUST00000185895 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm21896-201ENSMUST00000186520 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm21873-201ENSMUST00000186728 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm21794-201ENSMUST00000187056 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm21880-201ENSMUST00000187275 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm21826-201ENSMUST00000187451 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm21198-201ENSMUST00000188393 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm21749-201ENSMUST00000189343 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm21901-201ENSMUST00000189568 696 ntBASIC13.32□□□□□ -0.28
Bcas2Q9D287 Gm29424-201ENSMUST00000189716 696 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms