Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd1Q9D0E3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd1Q9D0E3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lysmd1Q9D0E3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd1Q9D0E3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Lysmd1Q9D0E3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.51□□□□□ -0.09
Lysmd1Q9D0E3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lysmd1Q9D0E3 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.51□□□□□ -0.09
Lysmd1Q9D0E3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Gm8712-201ENSMUST00000221090 701 ntBASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Lysmd1Q9D0E3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Gm15770-201ENSMUST00000117498 584 ntBASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd1Q9D0E3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Gm11450-201ENSMUST00000121144 333 ntBASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Gm3793-201ENSMUST00000204973 672 ntBASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms