Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Gm27631-201ENSMUST00000184163 466 ntBASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shmt2Q9CZN7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.16□□□□□ -0.3
Shmt2Q9CZN7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Gm15653-201ENSMUST00000119247 907 ntBASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Gm14767-201ENSMUST00000121559 586 ntBASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Gm12882-201ENSMUST00000121696 517 ntBASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Gm27618-201ENSMUST00000183671 60 ntBASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Shmt2Q9CZN7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms