Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Mir8117-201ENSMUST00000184773 107 ntBASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.65□□□□□ -0.22
Ssu72Q9CY97 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssu72Q9CY97 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Gm45612-201ENSMUST00000211320 160 ntBASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssu72Q9CY97 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.63□□□□□ -0.23
Ssu72Q9CY97 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssu72Q9CY97 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms