Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Gm23270-201ENSMUST00000104055 131 ntBASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Gm2231-201ENSMUST00000125661 612 ntBASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Gm9211-201ENSMUST00000182882 975 ntBASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Gm15770-201ENSMUST00000117498 584 ntBASIC13.67□□□□□ -0.22
Cdh23Q99PF4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Gm9555-201ENSMUST00000200908 583 ntBASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Gm13045-201ENSMUST00000119019 712 ntBASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Gm17330-201ENSMUST00000221047 165 ntBASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh23Q99PF4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gm4768-201ENSMUST00000206199 686 ntBASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gm16372-201ENSMUST00000073088 450 ntBASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gm18734-201ENSMUST00000172937 808 ntBASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gm7600-201ENSMUST00000209657 785 ntBASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.66□□□□□ -0.22
Cdh23Q99PF4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh23Q99PF4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm12403-201ENSMUST00000121384 959 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm11675-201ENSMUST00000121873 832 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm8738-201ENSMUST00000172606 329 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh23Q99PF4 Gm25517-201ENSMUST00000083865 134 ntBASIC13.65□□□□□ -0.22
Cdh23Q99PF4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms