Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Gm43133-201ENSMUST00000197472 463 ntBASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Mir433-201ENSMUST00000093564 124 ntBASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-1Q99MA9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gm12241-201ENSMUST00000118330 726 ntBASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gm13369-201ENSMUST00000119442 987 ntBASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gm11793-201ENSMUST00000120433 981 ntBASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gm45865-201ENSMUST00000211815 945 ntBASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms