Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1b1Q99LU0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chmp1b1Q99LU0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1b1Q99LU0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1b1Q99LU0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1b1Q99LU0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1b1Q99LU0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1b1Q99LU0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1b1Q99LU0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1b1Q99LU0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1b1Q99LU0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1b1Q99LU0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1b1Q99LU0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1b1Q99LU0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1b1Q99LU0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Chmp1b1Q99LU0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1b1Q99LU0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Dupd1-202ENSMUST00000224735 548 ntBASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Chmp1b1Q99LU0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chmp1b1Q99LU0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 BC001981-202ENSMUST00000191393 1545 ntBASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Mir1897-201ENSMUST00000122581 272 ntBASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Gm27622-201ENSMUST00000183779 60 ntBASIC13□□□□□ -0.33
Chmp1b1Q99LU0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 AC131690.1-201ENSMUST00000218406 374 ntBASIC13□□□□□ -0.33
Chmp1b1Q99LU0 AC121804.3-201ENSMUST00000223420 295 ntBASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms