Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Gm19309-201ENSMUST00000218295 205 ntBASIC15.79■□□□□ 0.12
Rfc4Q99J62 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Itm2b-204ENSMUST00000228637 783 ntBASIC15.79■□□□□ 0.12
Rfc4Q99J62 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rfc4Q99J62 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Gm14723-201ENSMUST00000118686 215 ntBASIC15.78■□□□□ 0.12
Rfc4Q99J62 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.78■□□□□ 0.12
Rfc4Q99J62 Gm1335-201ENSMUST00000121653 386 ntBASIC15.78■□□□□ 0.12
Rfc4Q99J62 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Gm9823-201ENSMUST00000051212 327 ntBASIC15.78■□□□□ 0.12
Rfc4Q99J62 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.78■□□□□ 0.12
Rfc4Q99J62 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc4Q99J62 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Gm12203-201ENSMUST00000118235 598 ntBASIC15.77■□□□□ 0.12
Rfc4Q99J62 Gm5687-201ENSMUST00000118252 640 ntBASIC15.77■□□□□ 0.12
Rfc4Q99J62 Gm12209-201ENSMUST00000120089 596 ntBASIC15.77■□□□□ 0.12
Rfc4Q99J62 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc4Q99J62 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc4Q99J62 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc4Q99J62 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc4Q99J62 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc4Q99J62 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc4Q99J62 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc4Q99J62 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc4Q99J62 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Rfc4Q99J62 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Gm3961-201ENSMUST00000204425 994 ntBASIC15.76■□□□□ 0.11
Rfc4Q99J62 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc4Q99J62 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms