Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.96■□□□□ 0.15
StrcQ8VIM6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
StrcQ8VIM6 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
StrcQ8VIM6 Gm11930-201ENSMUST00000117788 190 ntBASIC15.96■□□□□ 0.14
StrcQ8VIM6 Gm13492-201ENSMUST00000119772 665 ntBASIC15.96■□□□□ 0.14
StrcQ8VIM6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
StrcQ8VIM6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
StrcQ8VIM6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.96■□□□□ 0.14
StrcQ8VIM6 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.96■□□□□ 0.14
StrcQ8VIM6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
StrcQ8VIM6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
StrcQ8VIM6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
StrcQ8VIM6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
StrcQ8VIM6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Gm27552-201ENSMUST00000183351 62 ntBASIC15.95■□□□□ 0.14
StrcQ8VIM6 Gm27844-201ENSMUST00000183613 62 ntBASIC15.95■□□□□ 0.14
StrcQ8VIM6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.95■□□□□ 0.14
StrcQ8VIM6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15.95■□□□□ 0.14
StrcQ8VIM6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.95■□□□□ 0.14
StrcQ8VIM6 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.95■□□□□ 0.14
StrcQ8VIM6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.95■□□□□ 0.14
StrcQ8VIM6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
StrcQ8VIM6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.94■□□□□ 0.14
StrcQ8VIM6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gm12380-201ENSMUST00000119012 544 ntBASIC15.94■□□□□ 0.14
StrcQ8VIM6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gm37666-201ENSMUST00000194110 866 ntBASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gm7003-201ENSMUST00000195089 312 ntBASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gm38092-201ENSMUST00000195600 653 ntBASIC15.94■□□□□ 0.14
StrcQ8VIM6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
StrcQ8VIM6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gm11667-201ENSMUST00000119828 486 ntBASIC15.94■□□□□ 0.14
StrcQ8VIM6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.94■□□□□ 0.14
StrcQ8VIM6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gm45118-201ENSMUST00000208928 825 ntBASIC15.94■□□□□ 0.14
StrcQ8VIM6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
StrcQ8VIM6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.93■□□□□ 0.14
StrcQ8VIM6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.93■□□□□ 0.14
StrcQ8VIM6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms