Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim60Q8VI40 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Gm2213-201ENSMUST00000197485 688 ntBASIC14.22□□□□□ -0.13
Trim60Q8VI40 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.22□□□□□ -0.13
Trim60Q8VI40 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
Trim60Q8VI40 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Gm25911-201ENSMUST00000157621 56 ntBASIC14.21□□□□□ -0.13
Trim60Q8VI40 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim60Q8VI40 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.21□□□□□ -0.13
Trim60Q8VI40 Gm6916-202ENSMUST00000205523 195 ntBASIC14.21□□□□□ -0.13
Trim60Q8VI40 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Gm16476-201ENSMUST00000221544 139 ntBASIC14.21□□□□□ -0.13
Trim60Q8VI40 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim60Q8VI40 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim60Q8VI40 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim60Q8VI40 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim60Q8VI40 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trim60Q8VI40 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim60Q8VI40 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trim60Q8VI40 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm22065-201ENSMUST00000103753 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm22066-201ENSMUST00000103761 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm24932-201ENSMUST00000103763 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm24115-201ENSMUST00000103799 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm22190-201ENSMUST00000103827 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm22191-201ENSMUST00000103831 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm24721-201ENSMUST00000103849 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm28018-201ENSMUST00000103869 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm26399-201ENSMUST00000103937 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm11594-201ENSMUST00000122313 162 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm24158-201ENSMUST00000175263 71 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm25349-201ENSMUST00000177728 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm23616-201ENSMUST00000177797 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm25871-201ENSMUST00000177816 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm24752-201ENSMUST00000178240 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm24496-201ENSMUST00000178287 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm25649-201ENSMUST00000178476 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm25548-201ENSMUST00000178681 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm23147-201ENSMUST00000178841 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm26095-201ENSMUST00000179270 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm22171-201ENSMUST00000179283 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm23936-201ENSMUST00000179354 110 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms