Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.39□□□□□ -0.27
Vps4aQ8VEJ9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.38□□□□□ -0.27
Vps4aQ8VEJ9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Gm27838-201ENSMUST00000184829 128 ntBASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps4aQ8VEJ9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Gm14719-201ENSMUST00000121891 340 ntBASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps4aQ8VEJ9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms