Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.2□□□□□ -0.3
Lsm1Q8VC85 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Gm6415-201ENSMUST00000118488 348 ntBASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Mir1897-201ENSMUST00000122581 272 ntBASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Gm15460-201ENSMUST00000118147 391 ntBASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Gm15653-201ENSMUST00000119247 907 ntBASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.19□□□□□ -0.3
Lsm1Q8VC85 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Gm18041-201ENSMUST00000218210 618 ntBASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Shd-206ENSMUST00000225145 998 ntBASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm1Q8VC85 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Mir449b-201ENSMUST00000104833 80 ntBASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Gm7774-201ENSMUST00000200064 533 ntBASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms