Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm25948-201ENSMUST00000175334 112 ntBASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf8Q8VC56 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Gm22175-201ENSMUST00000175007 78 ntBASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf8Q8VC56 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.27□□□□□ -0.28
Rnf8Q8VC56 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf8Q8VC56 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf8Q8VC56 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rnf8Q8VC56 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.27□□□□□ -0.28
Rnf8Q8VC56 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf8Q8VC56 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf8Q8VC56 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf8Q8VC56 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf8Q8VC56 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Gm13015-201ENSMUST00000118674 204 ntBASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Mir6956-201ENSMUST00000183598 62 ntBASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf8Q8VC56 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf8Q8VC56 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms