Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Top1mtQ8R4U6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.45■□□□□ 0.22
Top1mtQ8R4U6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Gm9522-201ENSMUST00000182394 926 ntBASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Top1mtQ8R4U6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Top1mtQ8R4U6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms