Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Gm6736-201ENSMUST00000166583 948 ntBASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Gm18041-201ENSMUST00000218210 618 ntBASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cchcr1Q8K2I2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cchcr1Q8K2I2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cchcr1Q8K2I2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cchcr1Q8K2I2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cchcr1Q8K2I2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Cchcr1Q8K2I2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Gm15393-201ENSMUST00000120499 219 ntBASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Gm27430-201ENSMUST00000184585 107 ntBASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Gm44333-201ENSMUST00000197168 107 ntBASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Gm46209-201ENSMUST00000217912 553 ntBASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cchcr1Q8K2I2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Gm27702-201ENSMUST00000184512 56 ntBASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cchcr1Q8K2I2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms