Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Gm9824-201ENSMUST00000178707 561 ntBASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Mir6956-201ENSMUST00000183598 62 ntBASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc87Q8CDL9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Gm27430-201ENSMUST00000184585 107 ntBASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Gm44333-201ENSMUST00000197168 107 ntBASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Gm44872-201ENSMUST00000207864 420 ntBASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc87Q8CDL9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Ccdc87Q8CDL9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc87Q8CDL9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms