Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Gm6443-201ENSMUST00000203599 874 ntBASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd4Q8CC84 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lysmd4Q8CC84 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Gm1401-201ENSMUST00000122048 772 ntBASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd4Q8CC84 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms