Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Gm12859-201ENSMUST00000117834 427 ntBASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Usp44Q8C2S0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Gm5866-201ENSMUST00000177881 973 ntBASIC16.05■□□□□ 0.16
Usp44Q8C2S0 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.05■□□□□ 0.16
Usp44Q8C2S0 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Usp44Q8C2S0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms