Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Gm2451-201ENSMUST00000199447 999 ntBASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Gm10290-201ENSMUST00000200451 999 ntBASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam43aQ8BUP8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Gm27494-201ENSMUST00000184735 189 ntBASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam43aQ8BUP8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Gm27920-201ENSMUST00000183953 96 ntBASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam43aQ8BUP8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Fam43aQ8BUP8 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Gm9726-201ENSMUST00000180321 678 ntBASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Chchd1-203ENSMUST00000224633 557 ntBASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam43aQ8BUP8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms