Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Gm13392-201ENSMUST00000117708 150 ntBASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Gm13612-201ENSMUST00000119276 390 ntBASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Gm40466-201ENSMUST00000212174 422 ntBASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Rd3Q8BRE0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.54□□□□□ -0.08
Rd3Q8BRE0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rd3Q8BRE0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms