Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Gm15487-201ENSMUST00000122373 465 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Gm27321-201ENSMUST00000185021 205 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Gm43703-201ENSMUST00000200523 763 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Gm46209-201ENSMUST00000217912 553 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Mir125a-201ENSMUST00000083545 68 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4Q8BQZ5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms