Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm29741-201ENSMUST00000192667 421 ntBASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Gm7730-201ENSMUST00000212486 454 ntBASIC14.03□□□□□ -0.16
Sfr1Q8BP27 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sfr1Q8BP27 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sfr1Q8BP27 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Gm16215-201ENSMUST00000161990 637 ntBASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sfr1Q8BP27 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Gm6912-201ENSMUST00000117218 544 ntBASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Gm21854-201ENSMUST00000179901 471 ntBASIC14.01□□□□□ -0.17
Sfr1Q8BP27 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.01□□□□□ -0.17
Sfr1Q8BP27 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.01□□□□□ -0.17
Sfr1Q8BP27 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sfr1Q8BP27 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sfr1Q8BP27 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sfr1Q8BP27 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms