Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smg1Q8BKX6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smg1Q8BKX6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smg1Q8BKX6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smg1Q8BKX6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smg1Q8BKX6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.37□□□□□ -0.59
Smg1Q8BKX6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smg1Q8BKX6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smg1Q8BKX6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smg1Q8BKX6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Gm38144-201ENSMUST00000192790 465 ntBASIC11.36□□□□□ -0.59
Smg1Q8BKX6 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Smg1Q8BKX6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Gm30285-201ENSMUST00000214614 422 ntBASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.35□□□□□ -0.59
Smg1Q8BKX6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Gm29741-201ENSMUST00000192667 421 ntBASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Gm10434-201ENSMUST00000101158 471 ntBASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms