Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Mir6990-201ENSMUST00000183724 91 ntBASIC13.29□□□□□ -0.28
Rnf38Q8BI21 AA619741-201ENSMUST00000195095 646 ntBASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Rnf38Q8BI21 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gm12428-201ENSMUST00000119844 727 ntBASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gm44335-201ENSMUST00000196879 141 ntBASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gm44297-201ENSMUST00000198304 141 ntBASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gm44346-201ENSMUST00000198851 141 ntBASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gm5867-201ENSMUST00000063197 592 ntBASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf38Q8BI21 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Rnf38Q8BI21 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf38Q8BI21 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf38Q8BI21 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf38Q8BI21 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf38Q8BI21 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf38Q8BI21 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf38Q8BI21 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Rnf38Q8BI21 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf38Q8BI21 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf38Q8BI21 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 AA543401-201ENSMUST00000164248 1269 ntBASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Mir497b-201ENSMUST00000093601 125 ntBASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf38Q8BI21 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms