Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rpp38Q80UU2 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.73□□□□□ -0.21
Rpp38Q80UU2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpp38Q80UU2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpp38Q80UU2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpp38Q80UU2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rpp38Q80UU2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rpp38Q80UU2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Gm43094-201ENSMUST00000196549 921 ntBASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpp38Q80UU2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Gm16215-201ENSMUST00000161990 637 ntBASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Gm42612-201ENSMUST00000197986 623 ntBASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Gm43170-201ENSMUST00000199827 612 ntBASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Gm17330-201ENSMUST00000221047 165 ntBASIC13.71□□□□□ -0.21
Rpp38Q80UU2 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Gm5161-201ENSMUST00000075243 853 ntBASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.71□□□□□ -0.21
Rpp38Q80UU2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rpp38Q80UU2 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.71□□□□□ -0.22
Rpp38Q80UU2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rpp38Q80UU2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Rpp38Q80UU2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rpp38Q80UU2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rpp38Q80UU2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Gm19078-201ENSMUST00000206311 727 ntBASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Gm7730-201ENSMUST00000212486 454 ntBASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpp38Q80UU2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms