Protein–RNA interactions for Protein: Q80SW5

Etd, ETD, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EtdQ80SW5 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
EtdQ80SW5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
EtdQ80SW5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
EtdQ80SW5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
EtdQ80SW5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
EtdQ80SW5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
EtdQ80SW5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
EtdQ80SW5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
EtdQ80SW5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
EtdQ80SW5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
EtdQ80SW5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
EtdQ80SW5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
EtdQ80SW5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
EtdQ80SW5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
EtdQ80SW5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.65□□□□□ -0.71
EtdQ80SW5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
EtdQ80SW5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.64□□□□□ -0.71
EtdQ80SW5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.64□□□□□ -0.71
EtdQ80SW5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
EtdQ80SW5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
EtdQ80SW5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Gm5479-201ENSMUST00000160578 435 ntBASIC10.63□□□□□ -0.71
EtdQ80SW5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Gm5682-201ENSMUST00000173402 505 ntBASIC10.63□□□□□ -0.71
EtdQ80SW5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
EtdQ80SW5 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.63□□□□□ -0.71
EtdQ80SW5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.63□□□□□ -0.71
EtdQ80SW5 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
EtdQ80SW5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms