Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.28■□□□□ 0.2
Col11a2Q64739 Gm3096-201ENSMUST00000185770 364 ntBASIC16.28■□□□□ 0.2
Col11a2Q64739 Gm8099-201ENSMUST00000200510 742 ntBASIC16.28■□□□□ 0.2
Col11a2Q64739 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col11a2Q64739 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col11a2Q64739 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col11a2Q64739 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Col11a2Q64739 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Col11a2Q64739 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col11a2Q64739 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.27■□□□□ 0.2
Col11a2Q64739 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col11a2Q64739 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col11a2Q64739 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.27■□□□□ 0.19
Col11a2Q64739 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.27■□□□□ 0.19
Col11a2Q64739 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col11a2Q64739 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Col11a2Q64739 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Col11a2Q64739 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col11a2Q64739 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC16.27■□□□□ 0.19
Col11a2Q64739 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
Col11a2Q64739 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col11a2Q64739 Gm8908-201ENSMUST00000121633 1024 ntBASIC16.27■□□□□ 0.19
Col11a2Q64739 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.27■□□□□ 0.19
Col11a2Q64739 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col11a2Q64739 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.27■□□□□ 0.19
Col11a2Q64739 Gm43378-201ENSMUST00000199336 582 ntBASIC16.27■□□□□ 0.19
Col11a2Q64739 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col11a2Q64739 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col11a2Q64739 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col11a2Q64739 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Col11a2Q64739 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.27■□□□□ 0.19
Col11a2Q64739 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.26■□□□□ 0.19
Col11a2Q64739 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a2Q64739 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a2Q64739 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a2Q64739 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.26■□□□□ 0.19
Col11a2Q64739 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a2Q64739 Gm44126-201ENSMUST00000204831 514 ntBASIC16.26■□□□□ 0.19
Col11a2Q64739 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.26■□□□□ 0.19
Col11a2Q64739 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.26■□□□□ 0.19
Col11a2Q64739 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col11a2Q64739 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a2Q64739 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.26■□□□□ 0.19
Col11a2Q64739 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a2Q64739 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a2Q64739 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a2Q64739 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col11a2Q64739 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col11a2Q64739 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Col11a2Q64739 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.25■□□□□ 0.19
Col11a2Q64739 Gm9555-201ENSMUST00000200908 583 ntBASIC16.25■□□□□ 0.19
Col11a2Q64739 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Gm44100-201ENSMUST00000204329 436 ntBASIC16.25■□□□□ 0.19
Col11a2Q64739 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.25■□□□□ 0.19
Col11a2Q64739 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Col11a2Q64739 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Gm24749-201ENSMUST00000157838 343 ntBASIC16.25■□□□□ 0.19
Col11a2Q64739 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.25■□□□□ 0.19
Col11a2Q64739 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Col11a2Q64739 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col11a2Q64739 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col11a2Q64739 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col11a2Q64739 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col11a2Q64739 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.24■□□□□ 0.19
Col11a2Q64739 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.24■□□□□ 0.19
Col11a2Q64739 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.24■□□□□ 0.19
Col11a2Q64739 Gm7467-201ENSMUST00000185173 652 ntBASIC16.24■□□□□ 0.19
Col11a2Q64739 Gm44405-201ENSMUST00000198952 126 ntBASIC16.24■□□□□ 0.19
Col11a2Q64739 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col11a2Q64739 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col11a2Q64739 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col11a2Q64739 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Col11a2Q64739 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms