Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim27Q62158 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim27Q62158 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim27Q62158 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim27Q62158 Auts2-212ENSMUST00000178555 309 ntBASIC16.87■□□□□ 0.29
Trim27Q62158 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim27Q62158 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.87■□□□□ 0.29
Trim27Q62158 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim27Q62158 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.87■□□□□ 0.29
Trim27Q62158 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Trim27Q62158 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim27Q62158 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.86■□□□□ 0.29
Trim27Q62158 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim27Q62158 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.86■□□□□ 0.29
Trim27Q62158 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim27Q62158 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim27Q62158 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.85■□□□□ 0.29
Trim27Q62158 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim27Q62158 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim27Q62158 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim27Q62158 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.85■□□□□ 0.29
Trim27Q62158 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.85■□□□□ 0.29
Trim27Q62158 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trim27Q62158 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Trim27Q62158 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim27Q62158 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim27Q62158 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim27Q62158 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim27Q62158 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.84■□□□□ 0.29
Trim27Q62158 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trim27Q62158 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.84■□□□□ 0.29
Trim27Q62158 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.84■□□□□ 0.29
Trim27Q62158 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Gm27772-201ENSMUST00000184900 187 ntBASIC16.84■□□□□ 0.29
Trim27Q62158 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.84■□□□□ 0.29
Trim27Q62158 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.84■□□□□ 0.29
Trim27Q62158 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim27Q62158 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim27Q62158 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.84■□□□□ 0.29
Trim27Q62158 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim27Q62158 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.84■□□□□ 0.29
Trim27Q62158 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim27Q62158 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim27Q62158 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Trim27Q62158 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim27Q62158 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim27Q62158 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.83■□□□□ 0.29
Trim27Q62158 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms