Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Gm29155-201ENSMUST00000185910 269 ntBASIC12.61□□□□□ -0.39
VcanQ62059 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcanQ62059 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
VcanQ62059 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
VcanQ62059 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
VcanQ62059 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VcanQ62059 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.6□□□□□ -0.39
VcanQ62059 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.6□□□□□ -0.39
VcanQ62059 Gm8712-201ENSMUST00000221090 701 ntBASIC12.6□□□□□ -0.39
VcanQ62059 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Gm11618-201ENSMUST00000117946 267 ntBASIC12.6□□□□□ -0.39
VcanQ62059 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.6□□□□□ -0.39
VcanQ62059 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
VcanQ62059 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
VcanQ62059 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.6□□□□□ -0.39
VcanQ62059 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
VcanQ62059 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcanQ62059 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.6□□□□□ -0.39
VcanQ62059 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
VcanQ62059 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VcanQ62059 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.59□□□□□ -0.39
VcanQ62059 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.59□□□□□ -0.39
VcanQ62059 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
VcanQ62059 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VcanQ62059 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VcanQ62059 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.59□□□□□ -0.39
VcanQ62059 Gm18734-201ENSMUST00000172937 808 ntBASIC12.59□□□□□ -0.39
VcanQ62059 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
VcanQ62059 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.59□□□□□ -0.39
VcanQ62059 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcanQ62059 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VcanQ62059 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.58□□□□□ -0.39
VcanQ62059 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.58□□□□□ -0.39
VcanQ62059 Gm7003-201ENSMUST00000195089 312 ntBASIC12.58□□□□□ -0.39
VcanQ62059 Ntng1-201ENSMUST00000051253 327 ntBASIC12.58□□□□□ -0.39
VcanQ62059 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VcanQ62059 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
VcanQ62059 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VcanQ62059 Gm11801-201ENSMUST00000117807 746 ntBASIC12.58□□□□□ -0.4
VcanQ62059 Gm17391-201ENSMUST00000171036 126 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms