Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rai1Q61818 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rai1Q61818 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rai1Q61818 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rai1Q61818 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rai1Q61818 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.09□□□□□ -0.31
Rai1Q61818 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rai1Q61818 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.09□□□□□ -0.31
Rai1Q61818 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.09□□□□□ -0.31
Rai1Q61818 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.09□□□□□ -0.31
Rai1Q61818 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Rai1Q61818 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rai1Q61818 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rai1Q61818 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rai1Q61818 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rai1Q61818 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rai1Q61818 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.08□□□□□ -0.31
Rai1Q61818 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rai1Q61818 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rai1Q61818 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rai1Q61818 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
Rai1Q61818 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.08□□□□□ -0.31
Rai1Q61818 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Rai1Q61818 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Rai1Q61818 Gm11637-201ENSMUST00000120601 592 ntBASIC13.08□□□□□ -0.32
Rai1Q61818 Gm12363-201ENSMUST00000122250 668 ntBASIC13.08□□□□□ -0.32
Rai1Q61818 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.08□□□□□ -0.32
Rai1Q61818 Gm26185-201ENSMUST00000157692 266 ntBASIC13.08□□□□□ -0.32
Rai1Q61818 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.08□□□□□ -0.32
Rai1Q61818 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Mir7070-201ENSMUST00000183657 86 ntBASIC13.08□□□□□ -0.32
Rai1Q61818 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.08□□□□□ -0.32
Rai1Q61818 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rai1Q61818 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rai1Q61818 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.08□□□□□ -0.32
Rai1Q61818 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.08□□□□□ -0.32
Rai1Q61818 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rai1Q61818 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Rai1Q61818 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.08□□□□□ -0.32
Rai1Q61818 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rai1Q61818 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rai1Q61818 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Rai1Q61818 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rai1Q61818 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.07□□□□□ -0.32
Rai1Q61818 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Gm11591-201ENSMUST00000120063 702 ntBASIC13.07□□□□□ -0.32
Rai1Q61818 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.07□□□□□ -0.32
Rai1Q61818 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.07□□□□□ -0.32
Rai1Q61818 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.07□□□□□ -0.32
Rai1Q61818 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rai1Q61818 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.07□□□□□ -0.32
Rai1Q61818 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rai1Q61818 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms