Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.87□□□□□ -0.19
Six4Q61321 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.87□□□□□ -0.19
Six4Q61321 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Six4Q61321 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Six4Q61321 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Six4Q61321 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Six4Q61321 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.86□□□□□ -0.19
Six4Q61321 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.86□□□□□ -0.19
Six4Q61321 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.86□□□□□ -0.19
Six4Q61321 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Acot6-202ENSMUST00000222921 3622 ntBASIC13.86□□□□□ -0.19
Six4Q61321 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.86□□□□□ -0.19
Six4Q61321 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Six4Q61321 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.86□□□□□ -0.19
Six4Q61321 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.86□□□□□ -0.19
Six4Q61321 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Six4Q61321 Gm44719-201ENSMUST00000206404 149 ntBASIC13.86□□□□□ -0.19
Six4Q61321 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Six4Q61321 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Six4Q61321 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Six4Q61321 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Six4Q61321 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Six4Q61321 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.85□□□□□ -0.19
Six4Q61321 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Six4Q61321 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Six4Q61321 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.85□□□□□ -0.19
Six4Q61321 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Gm5354-201ENSMUST00000182417 973 ntBASIC13.85□□□□□ -0.19
Six4Q61321 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Six4Q61321 Gm28631-201ENSMUST00000190740 334 ntBASIC13.85□□□□□ -0.19
Six4Q61321 Gm19078-201ENSMUST00000206311 727 ntBASIC13.85□□□□□ -0.19
Six4Q61321 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.85□□□□□ -0.19
Six4Q61321 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.85□□□□□ -0.19
Six4Q61321 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.85□□□□□ -0.19
Six4Q61321 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.85□□□□□ -0.19
Six4Q61321 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Six4Q61321 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Six4Q61321 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms