Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ripk1Q60855 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Ripk1Q60855 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Gm14767-201ENSMUST00000121559 586 ntBASIC12.99□□□□□ -0.33
Ripk1Q60855 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ripk1Q60855 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Gm27680-201ENSMUST00000184192 160 ntBASIC12.99□□□□□ -0.33
Ripk1Q60855 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.99□□□□□ -0.33
Ripk1Q60855 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ripk1Q60855 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ripk1Q60855 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ripk1Q60855 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.99□□□□□ -0.33
Ripk1Q60855 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.98□□□□□ -0.33
Ripk1Q60855 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.98□□□□□ -0.33
Ripk1Q60855 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.98□□□□□ -0.33
Ripk1Q60855 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ripk1Q60855 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ripk1Q60855 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.98□□□□□ -0.33
Ripk1Q60855 Gm44344-201ENSMUST00000200287 129 ntBASIC12.98□□□□□ -0.33
Ripk1Q60855 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.98□□□□□ -0.33
Ripk1Q60855 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.98□□□□□ -0.33
Ripk1Q60855 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.98□□□□□ -0.33
Ripk1Q60855 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ripk1Q60855 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.98□□□□□ -0.33
Ripk1Q60855 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ripk1Q60855 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ripk1Q60855 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ripk1Q60855 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.97□□□□□ -0.33
Ripk1Q60855 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.97□□□□□ -0.33
Ripk1Q60855 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ripk1Q60855 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.97□□□□□ -0.33
Ripk1Q60855 Gm6888-201ENSMUST00000221983 706 ntBASIC12.97□□□□□ -0.33
Ripk1Q60855 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ripk1Q60855 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Ripk1Q60855 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.97□□□□□ -0.33
Ripk1Q60855 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ripk1Q60855 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Ripk1Q60855 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.97□□□□□ -0.33
Ripk1Q60855 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.97□□□□□ -0.33
Ripk1Q60855 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms