Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col12a1Q60847 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.27□□□□□ -0.28
Col12a1Q60847 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.27□□□□□ -0.28
Col12a1Q60847 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col12a1Q60847 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.27□□□□□ -0.29
Col12a1Q60847 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.27□□□□□ -0.29
Col12a1Q60847 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.27□□□□□ -0.29
Col12a1Q60847 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Col12a1Q60847 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.27□□□□□ -0.29
Col12a1Q60847 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col12a1Q60847 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Col12a1Q60847 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.26□□□□□ -0.29
Col12a1Q60847 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.26□□□□□ -0.29
Col12a1Q60847 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.26□□□□□ -0.29
Col12a1Q60847 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.26□□□□□ -0.29
Col12a1Q60847 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm15131-201ENSMUST00000119124 595 ntBASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm24749-201ENSMUST00000157838 343 ntBASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm19353-201ENSMUST00000184561 445 ntBASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm44405-201ENSMUST00000198952 126 ntBASIC13.26□□□□□ -0.29
Col12a1Q60847 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.26□□□□□ -0.29
Col12a1Q60847 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm7666-201ENSMUST00000146631 819 ntBASIC13.26□□□□□ -0.29
Col12a1Q60847 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
Col12a1Q60847 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.26□□□□□ -0.29
Col12a1Q60847 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col12a1Q60847 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col12a1Q60847 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.25□□□□□ -0.29
Col12a1Q60847 Gm7848-201ENSMUST00000210739 718 ntBASIC13.25□□□□□ -0.29
Col12a1Q60847 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.25□□□□□ -0.29
Col12a1Q60847 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col12a1Q60847 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col12a1Q60847 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col12a1Q60847 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.24□□□□□ -0.29
Col12a1Q60847 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.24□□□□□ -0.29
Col12a1Q60847 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.24□□□□□ -0.29
Col12a1Q60847 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.24□□□□□ -0.29
Col12a1Q60847 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.24□□□□□ -0.29
Col12a1Q60847 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.24□□□□□ -0.29
Col12a1Q60847 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms