Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm11793-201ENSMUST00000120433 981 ntBASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm45880-201ENSMUST00000213041 853 ntBASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc88aQ5SNZ0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm45865-201ENSMUST00000211815 945 ntBASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.64■□□□□ 0.09
Ccdc88aQ5SNZ0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Mir698-201ENSMUST00000102164 109 ntBASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm12241-201ENSMUST00000118330 726 ntBASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Proscos-202ENSMUST00000178990 666 ntBASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm38671-201ENSMUST00000200573 130 ntBASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Olfr284-202ENSMUST00000206647 966 ntBASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm6334-201ENSMUST00000207083 228 ntBASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm22323-201ENSMUST00000103832 109 ntBASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc88aQ5SNZ0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc88aQ5SNZ0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc88aQ5SNZ0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc88aQ5SNZ0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc88aQ5SNZ0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms