Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-3Q5R1C3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Gm7977-201ENSMUST00000193787 748 ntBASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-3Q5R1C3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Gm18489-201ENSMUST00000172565 551 ntBASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms