Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Gm37912-201ENSMUST00000191895 3076 ntBASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Gm8337-201ENSMUST00000187358 1938 ntBASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Gm6152-201ENSMUST00000151704 340 ntBASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Proscos-202ENSMUST00000178990 666 ntBASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Gm8598-201ENSMUST00000221184 836 ntBASIC23.75■■□□□ 1.39
Trim41Q5NCC3 AC154595.3-201ENSMUST00000224579 384 ntBASIC23.75■■□□□ 1.39
Trim41Q5NCC3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Gm12020-201ENSMUST00000119030 2042 ntBASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim41Q5NCC3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Gm11803-201ENSMUST00000119966 444 ntBASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Gm34767-201ENSMUST00000191813 1062 ntBASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 AC133598.1-201ENSMUST00000224327 660 ntBASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Gm37736-201ENSMUST00000193564 2802 ntBASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Trim41Q5NCC3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim41Q5NCC3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Gm22331-201ENSMUST00000158066 136 ntBASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Gm38144-201ENSMUST00000192790 465 ntBASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Gm17823-201ENSMUST00000217830 1006 ntBASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim41Q5NCC3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms