Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Gm8749-201ENSMUST00000117737 331 ntBASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Gm13464-201ENSMUST00000119418 935 ntBASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Pck2-205ENSMUST00000226352 2784 ntBASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Gm6159-201ENSMUST00000191249 1724 ntBASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cks1brtQ3UNC9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Gm8655-201ENSMUST00000221159 852 ntBASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms