Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spg11Q3UHA3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.54□□□□□ -0.4
Spg11Q3UHA3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spg11Q3UHA3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gm7902-201ENSMUST00000198842 947 ntBASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gm13888-201ENSMUST00000119148 422 ntBASIC12.53□□□□□ -0.4
Spg11Q3UHA3 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spg11Q3UHA3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.53□□□□□ -0.4
Spg11Q3UHA3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Gm13996-201ENSMUST00000118456 430 ntBASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spg11Q3UHA3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Gm11531-201ENSMUST00000117614 555 ntBASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.52□□□□□ -0.41
Spg11Q3UHA3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.52□□□□□ -0.41
Spg11Q3UHA3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms