Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim63Q38HM4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim63Q38HM4 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim63Q38HM4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim63Q38HM4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim63Q38HM4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.27□□□□□ -0.6
Trim63Q38HM4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim63Q38HM4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.27□□□□□ -0.6
Trim63Q38HM4 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.27□□□□□ -0.6
Trim63Q38HM4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Trim63Q38HM4 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trim63Q38HM4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim63Q38HM4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim63Q38HM4 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim63Q38HM4 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.27□□□□□ -0.6
Trim63Q38HM4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Gm15378-201ENSMUST00000121894 207 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms