Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc4Q08624 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Gm11425-201ENSMUST00000119608 498 ntBASIC13.17□□□□□ -0.3
Hoxc4Q08624 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.17□□□□□ -0.3
Hoxc4Q08624 AY702102-202ENSMUST00000194651 1173 ntBASIC13.17□□□□□ -0.3
Hoxc4Q08624 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.17□□□□□ -0.3
Hoxc4Q08624 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Gm9396-201ENSMUST00000076703 567 ntBASIC13.17□□□□□ -0.3
Hoxc4Q08624 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc4Q08624 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.16□□□□□ -0.3
Hoxc4Q08624 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Gm24644-201ENSMUST00000157114 139 ntBASIC13.16□□□□□ -0.3
Hoxc4Q08624 Proscos-202ENSMUST00000178990 666 ntBASIC13.16□□□□□ -0.3
Hoxc4Q08624 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Gm8598-201ENSMUST00000221184 836 ntBASIC13.16□□□□□ -0.3
Hoxc4Q08624 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.16□□□□□ -0.3
Hoxc4Q08624 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc4Q08624 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Gm13226-201ENSMUST00000117838 404 ntBASIC13.15□□□□□ -0.3
Hoxc4Q08624 Gm11803-201ENSMUST00000119966 444 ntBASIC13.15□□□□□ -0.3
Hoxc4Q08624 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.15□□□□□ -0.3
Hoxc4Q08624 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.15□□□□□ -0.3
Hoxc4Q08624 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Gm45784-201ENSMUST00000188360 142 ntBASIC13.15□□□□□ -0.3
Hoxc4Q08624 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc4Q08624 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxc4Q08624 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxc4Q08624 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxc4Q08624 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxc4Q08624 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxc4Q08624 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc4Q08624 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms