Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC13.24□□□□□ -0.29
Atf4Q06507 Gm6562-201ENSMUST00000221903 464 ntBASIC13.24□□□□□ -0.29
Atf4Q06507 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.24□□□□□ -0.29
Atf4Q06507 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Atf4Q06507 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.24□□□□□ -0.29
Atf4Q06507 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.24□□□□□ -0.29
Atf4Q06507 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Atf4Q06507 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf4Q06507 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Atf4Q06507 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.23□□□□□ -0.29
Atf4Q06507 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Atf4Q06507 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
Atf4Q06507 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Atf4Q06507 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Gm42995-201ENSMUST00000197047 1330 ntBASIC13.23□□□□□ -0.29
Atf4Q06507 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.23□□□□□ -0.29
Atf4Q06507 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC13.23□□□□□ -0.29
Atf4Q06507 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC13.23□□□□□ -0.29
Atf4Q06507 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.23□□□□□ -0.29
Atf4Q06507 Gm6222-201ENSMUST00000120787 396 ntBASIC13.23□□□□□ -0.29
Atf4Q06507 Gm15061-201ENSMUST00000121076 1046 ntBASIC13.23□□□□□ -0.29
Atf4Q06507 Gm14603-201ENSMUST00000121275 448 ntBASIC13.23□□□□□ -0.29
Atf4Q06507 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC13.23□□□□□ -0.29
Atf4Q06507 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Atf4Q06507 Gm27631-201ENSMUST00000184163 466 ntBASIC13.23□□□□□ -0.29
Atf4Q06507 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC13.23□□□□□ -0.29
Atf4Q06507 Gm28195-201ENSMUST00000186992 372 ntBASIC13.23□□□□□ -0.29
Atf4Q06507 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.23□□□□□ -0.29
Atf4Q06507 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.23□□□□□ -0.29
Atf4Q06507 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.23□□□□□ -0.29
Atf4Q06507 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.23□□□□□ -0.29
Atf4Q06507 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.23□□□□□ -0.29
Atf4Q06507 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.23□□□□□ -0.29
Atf4Q06507 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Gm42449-201ENSMUST00000200349 2258 ntBASIC13.23□□□□□ -0.29
Atf4Q06507 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.23□□□□□ -0.29
Atf4Q06507 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf4Q06507 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Atf4Q06507 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Atf4Q06507 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Atf4Q06507 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atf4Q06507 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf4Q06507 Gm37160-201ENSMUST00000193081 1689 ntBASIC13.22□□□□□ -0.29
Atf4Q06507 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf4Q06507 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf4Q06507 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Atf4Q06507 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf4Q06507 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf4Q06507 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Atf4Q06507 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atf4Q06507 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.22□□□□□ -0.29
Atf4Q06507 Gm25109-201ENSMUST00000122474 114 ntBASIC13.22□□□□□ -0.29
Atf4Q06507 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.22□□□□□ -0.29
Atf4Q06507 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.22□□□□□ -0.29
Atf4Q06507 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atf4Q06507 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Atf4Q06507 Mir6420-201ENSMUST00000185032 102 ntBASIC13.22□□□□□ -0.29
Atf4Q06507 Gm28760-201ENSMUST00000185995 736 ntBASIC13.22□□□□□ -0.29
Atf4Q06507 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms