Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm10925-201ENSMUST00000189941 678 ntBASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm42550-201ENSMUST00000201553 960 ntBASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm44262-201ENSMUST00000204969 372 ntBASIC13.5□□□□□ -0.25
Col9a1Q05722 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.5□□□□□ -0.25
Col9a1Q05722 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.5□□□□□ -0.25
Col9a1Q05722 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col9a1Q05722 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.5□□□□□ -0.25
Col9a1Q05722 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC13.49□□□□□ -0.25
Col9a1Q05722 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Gm7809-201ENSMUST00000153199 742 ntBASIC13.49□□□□□ -0.25
Col9a1Q05722 Gm26361-201ENSMUST00000158868 186 ntBASIC13.49□□□□□ -0.25
Col9a1Q05722 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.49□□□□□ -0.25
Col9a1Q05722 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Gm37213-201ENSMUST00000193077 586 ntBASIC13.49□□□□□ -0.25
Col9a1Q05722 AA914427-201ENSMUST00000193194 1166 ntBASIC13.49□□□□□ -0.25
Col9a1Q05722 Gm37215-201ENSMUST00000194927 1259 ntBASIC13.49□□□□□ -0.25
Col9a1Q05722 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.49□□□□□ -0.25
Col9a1Q05722 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col9a1Q05722 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.49□□□□□ -0.25
Col9a1Q05722 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col9a1Q05722 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col9a1Q05722 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 AC163296.2-201ENSMUST00000220177 1315 ntBASIC13.48□□□□□ -0.25
Col9a1Q05722 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.48□□□□□ -0.25
Col9a1Q05722 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC13.48□□□□□ -0.25
Col9a1Q05722 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC13.48□□□□□ -0.25
Col9a1Q05722 Gm37922-201ENSMUST00000195596 455 ntBASIC13.48□□□□□ -0.25
Col9a1Q05722 Gm43752-201ENSMUST00000198475 697 ntBASIC13.48□□□□□ -0.25
Col9a1Q05722 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC13.48□□□□□ -0.25
Col9a1Q05722 AC153932.1-201ENSMUST00000218558 787 ntBASIC13.48□□□□□ -0.25
Col9a1Q05722 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.48□□□□□ -0.25
Col9a1Q05722 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms