Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Pfdn6Q03958 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.83□□□□□ -0.19
Pfdn6Q03958 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Gm15460-201ENSMUST00000118147 391 ntBASIC13.83□□□□□ -0.2
Pfdn6Q03958 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.83□□□□□ -0.2
Pfdn6Q03958 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.83□□□□□ -0.2
Pfdn6Q03958 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.83□□□□□ -0.2
Pfdn6Q03958 Gm15393-201ENSMUST00000120499 219 ntBASIC13.83□□□□□ -0.2
Pfdn6Q03958 Gm14767-201ENSMUST00000121559 586 ntBASIC13.83□□□□□ -0.2
Pfdn6Q03958 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Gm46209-201ENSMUST00000217912 553 ntBASIC13.83□□□□□ -0.2
Pfdn6Q03958 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.83□□□□□ -0.2
Pfdn6Q03958 Shd-206ENSMUST00000225145 998 ntBASIC13.83□□□□□ -0.2
Pfdn6Q03958 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.83□□□□□ -0.2
Pfdn6Q03958 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.83□□□□□ -0.2
Pfdn6Q03958 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.83□□□□□ -0.2
Pfdn6Q03958 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Gm21470-201ENSMUST00000187680 696 ntBASIC13.82□□□□□ -0.2
Pfdn6Q03958 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.82□□□□□ -0.2
Pfdn6Q03958 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.82□□□□□ -0.2
Pfdn6Q03958 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn6Q03958 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.81□□□□□ -0.2
Pfdn6Q03958 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.81□□□□□ -0.2
Pfdn6Q03958 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.81□□□□□ -0.2
Pfdn6Q03958 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms