Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.72□□□□□ -0.21
Col6a2Q02788 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.72□□□□□ -0.21
Col6a2Q02788 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.71□□□□□ -0.21
Col6a2Q02788 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col6a2Q02788 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col6a2Q02788 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.71□□□□□ -0.21
Col6a2Q02788 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.71□□□□□ -0.21
Col6a2Q02788 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.71□□□□□ -0.21
Col6a2Q02788 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.71□□□□□ -0.21
Col6a2Q02788 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.71□□□□□ -0.21
Col6a2Q02788 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.71□□□□□ -0.21
Col6a2Q02788 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.71□□□□□ -0.21
Col6a2Q02788 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Col6a2Q02788 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a2Q02788 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a2Q02788 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.71□□□□□ -0.22
Col6a2Q02788 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Col6a2Q02788 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a2Q02788 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Col6a2Q02788 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Col6a2Q02788 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a2Q02788 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a2Q02788 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a2Q02788 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Col6a2Q02788 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col6a2Q02788 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col6a2Q02788 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Col6a2Q02788 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.7□□□□□ -0.22
Col6a2Q02788 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a2Q02788 Gm26464-201ENSMUST00000157094 305 ntBASIC13.7□□□□□ -0.22
Col6a2Q02788 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a2Q02788 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.7□□□□□ -0.22
Col6a2Q02788 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.7□□□□□ -0.22
Col6a2Q02788 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col6a2Q02788 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Col6a2Q02788 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a2Q02788 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col6a2Q02788 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col6a2Q02788 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.7□□□□□ -0.22
Col6a2Q02788 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a2Q02788 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Col6a2Q02788 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Col6a2Q02788 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms