Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 AV026068-213ENSMUST00000223675 1171 ntBASIC12.56□□□□□ -0.4
Scn1bP97952 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Scn1bP97952 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn1bP97952 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Gm15590-201ENSMUST00000078419 552 ntBASIC12.56□□□□□ -0.4
Scn1bP97952 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.56□□□□□ -0.4
Scn1bP97952 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Scn1bP97952 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scn1bP97952 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Scn1bP97952 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scn1bP97952 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scn1bP97952 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scn1bP97952 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.55□□□□□ -0.4
Scn1bP97952 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scn1bP97952 Gm11764-201ENSMUST00000120221 623 ntBASIC12.55□□□□□ -0.4
Scn1bP97952 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.55□□□□□ -0.4
Scn1bP97952 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.55□□□□□ -0.4
Scn1bP97952 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.55□□□□□ -0.4
Scn1bP97952 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scn1bP97952 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.55□□□□□ -0.4
Scn1bP97952 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.55□□□□□ -0.4
Scn1bP97952 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scn1bP97952 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1bP97952 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Pck2-205ENSMUST00000226352 2784 ntBASIC12.54□□□□□ -0.4
Scn1bP97952 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn1bP97952 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn1bP97952 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.54□□□□□ -0.4
Scn1bP97952 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scn1bP97952 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn1bP97952 Gm4899-201ENSMUST00000178708 719 ntBASIC12.54□□□□□ -0.4
Scn1bP97952 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.54□□□□□ -0.4
Scn1bP97952 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.54□□□□□ -0.4
Scn1bP97952 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.54□□□□□ -0.4
Scn1bP97952 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scn1bP97952 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Scn1bP97952 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Scn1bP97952 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1bP97952 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Scn1bP97952 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Scn1bP97952 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms