Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.01□□□□□ -0.33
Nkx3-2P97503 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nkx3-2P97503 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkx3-2P97503 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.01□□□□□ -0.33
Nkx3-2P97503 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.01□□□□□ -0.33
Nkx3-2P97503 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.01□□□□□ -0.33
Nkx3-2P97503 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.01□□□□□ -0.33
Nkx3-2P97503 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx3-2P97503 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13□□□□□ -0.33
Nkx3-2P97503 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nkx3-2P97503 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nkx3-2P97503 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkx3-2P97503 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13□□□□□ -0.33
Nkx3-2P97503 Gm6745-201ENSMUST00000199216 526 ntBASIC13□□□□□ -0.33
Nkx3-2P97503 AC155286.1-201ENSMUST00000218632 448 ntBASIC13□□□□□ -0.33
Nkx3-2P97503 Gm18027-201ENSMUST00000218947 619 ntBASIC13□□□□□ -0.33
Nkx3-2P97503 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkx3-2P97503 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13□□□□□ -0.33
Nkx3-2P97503 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Nkx3-2P97503 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nkx3-2P97503 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nkx3-2P97503 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nkx3-2P97503 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx3-2P97503 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.99□□□□□ -0.33
Nkx3-2P97503 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.99□□□□□ -0.33
Nkx3-2P97503 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms