Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.11□□□□□ -0.95
PrkdcP97313 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
PrkdcP97313 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.11□□□□□ -0.95
PrkdcP97313 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Mt1-202ENSMUST00000211807 1085 ntBASIC9.11□□□□□ -0.95
PrkdcP97313 Gm22058-201ENSMUST00000083393 310 ntBASIC9.11□□□□□ -0.95
PrkdcP97313 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
PrkdcP97313 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.11□□□□□ -0.95
PrkdcP97313 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC9.11□□□□□ -0.95
PrkdcP97313 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.11□□□□□ -0.95
PrkdcP97313 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC9.11□□□□□ -0.95
PrkdcP97313 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.1□□□□□ -0.95
PrkdcP97313 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC9.1□□□□□ -0.95
PrkdcP97313 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
PrkdcP97313 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.1□□□□□ -0.95
PrkdcP97313 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Gm38197-201ENSMUST00000192320 2122 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.1□□□□□ -0.95
PrkdcP97313 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 AC131690.1-201ENSMUST00000218406 374 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm6867-201ENSMUST00000219165 425 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Prrxl1-205ENSMUST00000228878 723 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
PrkdcP97313 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Gm11941-201ENSMUST00000119904 610 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm9358-201ENSMUST00000183067 927 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm29615-201ENSMUST00000185371 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm28224-201ENSMUST00000186078 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm29001-201ENSMUST00000186177 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm28292-201ENSMUST00000186593 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm28101-201ENSMUST00000187608 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm29076-201ENSMUST00000187689 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm28302-201ENSMUST00000187931 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm28646-201ENSMUST00000188220 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm28205-201ENSMUST00000189177 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm29032-201ENSMUST00000189797 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm28695-201ENSMUST00000190300 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Gm37448-201ENSMUST00000192795 697 ntBASIC9.1□□□□□ -0.95
PrkdcP97313 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
PrkdcP97313 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PrkdcP97313 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC9.1□□□□□ -0.95
PrkdcP97313 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PrkdcP97313 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC9.09□□□□□ -0.95
PrkdcP97313 Mir7076-201ENSMUST00000183519 74 ntBASIC9.09□□□□□ -0.95
PrkdcP97313 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Mir483-201ENSMUST00000093631 73 ntBASIC9.09□□□□□ -0.95
PrkdcP97313 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.09□□□□□ -0.95
PrkdcP97313 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms