Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.54□□□□□ -0.56
SgcaP82350 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
SgcaP82350 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.54□□□□□ -0.56
SgcaP82350 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
SgcaP82350 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SgcaP82350 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.53□□□□□ -0.56
SgcaP82350 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.53□□□□□ -0.56
SgcaP82350 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.53□□□□□ -0.56
SgcaP82350 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
SgcaP82350 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Gm45747-201ENSMUST00000212203 999 ntBASIC11.53□□□□□ -0.56
SgcaP82350 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.53□□□□□ -0.56
SgcaP82350 Gm10154-201ENSMUST00000084445 354 ntBASIC11.53□□□□□ -0.56
SgcaP82350 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.53□□□□□ -0.56
SgcaP82350 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcaP82350 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
SgcaP82350 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SgcaP82350 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SgcaP82350 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SgcaP82350 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.52□□□□□ -0.56
SgcaP82350 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SgcaP82350 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
SgcaP82350 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.52□□□□□ -0.57
SgcaP82350 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
SgcaP82350 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.52□□□□□ -0.57
SgcaP82350 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Gm9103-201ENSMUST00000119371 405 ntBASIC11.52□□□□□ -0.57
SgcaP82350 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.52□□□□□ -0.57
SgcaP82350 Gm43347-201ENSMUST00000200226 580 ntBASIC11.52□□□□□ -0.57
SgcaP82350 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.52□□□□□ -0.57
SgcaP82350 Gm6376-201ENSMUST00000209407 580 ntBASIC11.52□□□□□ -0.57
SgcaP82350 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.52□□□□□ -0.57
SgcaP82350 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
SgcaP82350 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
SgcaP82350 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcaP82350 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SgcaP82350 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcaP82350 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcaP82350 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.51□□□□□ -0.57
SgcaP82350 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcaP82350 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms