Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Gm43930-201ENSMUST00000203868 845 ntBASIC12.27□□□□□ -0.45
SgcbP82349 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SgcbP82349 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.27□□□□□ -0.45
SgcbP82349 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SgcbP82349 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SgcbP82349 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SgcbP82349 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.27□□□□□ -0.45
SgcbP82349 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SgcbP82349 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcbP82349 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SgcbP82349 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.26□□□□□ -0.45
SgcbP82349 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SgcbP82349 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.26□□□□□ -0.45
SgcbP82349 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SgcbP82349 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.26□□□□□ -0.45
SgcbP82349 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.26□□□□□ -0.45
SgcbP82349 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Gm19220-201ENSMUST00000222682 803 ntBASIC12.26□□□□□ -0.45
SgcbP82349 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SgcbP82349 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SgcbP82349 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SgcbP82349 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SgcbP82349 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.26□□□□□ -0.45
SgcbP82349 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcbP82349 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.26□□□□□ -0.45
SgcbP82349 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.25□□□□□ -0.45
SgcbP82349 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.25□□□□□ -0.45
SgcbP82349 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SgcbP82349 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SgcbP82349 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SgcbP82349 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SgcbP82349 Gm22189-201ENSMUST00000103822 86 ntBASIC12.25□□□□□ -0.45
SgcbP82349 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.25□□□□□ -0.45
SgcbP82349 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SgcbP82349 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.25□□□□□ -0.45
SgcbP82349 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.25□□□□□ -0.45
SgcbP82349 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SgcbP82349 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.25□□□□□ -0.45
SgcbP82349 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.25□□□□□ -0.45
SgcbP82349 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.25□□□□□ -0.45
SgcbP82349 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms