Protein–RNA interactions for Protein: P70217

Hoxd13, Homeobox protein Hox-D13, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd13P70217 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.17□□□□□ -0.14
Hoxd13P70217 Gm26315-201ENSMUST00000083890 321 ntBASIC14.17□□□□□ -0.14
Hoxd13P70217 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.17□□□□□ -0.14
Hoxd13P70217 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxd13P70217 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.17□□□□□ -0.14
Hoxd13P70217 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxd13P70217 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.17□□□□□ -0.14
Hoxd13P70217 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxd13P70217 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hoxd13P70217 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.16□□□□□ -0.14
Hoxd13P70217 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.16□□□□□ -0.14
Hoxd13P70217 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxd13P70217 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.16□□□□□ -0.14
Hoxd13P70217 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxd13P70217 Gm2445-201ENSMUST00000182798 989 ntBASIC14.16□□□□□ -0.14
Hoxd13P70217 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.16□□□□□ -0.14
Hoxd13P70217 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Gm18054-201ENSMUST00000207539 555 ntBASIC14.16□□□□□ -0.14
Hoxd13P70217 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxd13P70217 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.16□□□□□ -0.14
Hoxd13P70217 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.16□□□□□ -0.14
Hoxd13P70217 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.16□□□□□ -0.14
Hoxd13P70217 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.16□□□□□ -0.14
Hoxd13P70217 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxd13P70217 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hoxd13P70217 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Hoxd13P70217 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxd13P70217 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxd13P70217 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm12403-201ENSMUST00000121384 959 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxd13P70217 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Gm45880-201ENSMUST00000213041 853 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.15□□□□□ -0.14
Hoxd13P70217 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxd13P70217 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxd13P70217 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Hoxd13P70217 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Hoxd13P70217 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxd13P70217 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxd13P70217 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms